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Crop Sciences

University of Illinois at Urbana-Champaign

CPSC 564: Molecular Marker Data Analysis

2 hours

Course Description The general topic of this course is statistical analysis of molecular marker data. The subject matter includes types of molecular markers, manipulating molecular marker data sets, calculation of distance measures, cluster analysis, development of molecular marker maps, identifying marker-QTL associations, single factor analysis, multiple regression, interval mapping and application of molecular markers to plant breeding.
Course Objectives The objectives of this course are to provide the student with an understanding of various types of statistical analyses of molecular marker data and with hands on experience with various statistical packages.
Course Time Offered in Summer session I in alternate years. See the University Course Schedule for times.
Instructor For information, contact:

John W. Dudley
S-112 Turner Hall
Phone: (217) 333-9640
E-mail: jdudley@uiuc.edu (preferred)

Martin O. Bohn
S-110 Turner Hall
Phone: (217) 244-2536
E-mail: mbohn@uiuc.edu
Prerequisites CPSC 440 or equivalent, and CPSC 453 or equivalent. An advanced statistics course (e.g. CPSC 540 or ANSCI 445 or equivalent) and familiarity with SAS recommended.
Grading The course will include problem sets and a final examination. Grades will be based on the problem sets (50%) and the final examination (50%).